CodonCode Aligner is user-friendly software for continuous DNA sequencing, linking, adjoining editing and mutant detection . In addition to the usual features, CodonCode Aligner also offers a lot of special features that you cannot find in other software. This program is very easy to use, powerful and highly customizable. CodonCode Aligner also includes a help section with How to instructions and explanations of the algorithms used. This program has been widely used in fertility systems, evolutionary research, geobiology, mutant detection and other research fields.